2500 years ago, in India, Siddhartha was born as a prince of the Shakya clan, but he gives up his position as a prince to see the world. While he travels he meets a strange boy named Assaji, who can predict the future and a monk with only one eye. Overwhelmed by the sufferings he witnesses around him, Siddhartha strives to restore peace. Meanwhile, Prince Ruri of Kosara begins his attack on the Shakya clan.

Throughout history, an elite group of shrine maidens known as "Toji" have saved the world from "Aratama," strange and malevolent beings bent on destroying humanity. In modern times, these warriors have been assigned to a special police squad to exterminate Aratama. The government has also set up five elite schools across the country to provide young girls the necessary sword fighting skills to eradicate these monsters and eventually join their fellow Toji in protecting the world. A student of one of those five schools, Kanami Etou is chosen to represent Minoseki Academy in a sword fighting tournament, where she meets the mysterious Hiyori Juujou. Although Kanami and Hiyori rise to the top of the tournament, their battle takes an unexpected turn, throwing the world of the Toji into chaos. Likely that the Toji are facing betrayal from within, the two are forced to flee the tournament, clashing with former comrades on the way. [Written by MAL Rewrite]

Thirty-two years have passed since the initial defeat of the Invaders. A.E.G.I.S is all but dismantled now and has become an underground organization consisting of only a few Gate Keepers left to save humanity. One of the members, Ayane Isuzu, is sick of society as a whole, though she continues to defeat the Invaders out of spite for her father. Suddenly, she learns of the revival of Machine General (Kikai Shogun) and Devil Count (Akuma Hakushaku), but a mysterious ghost girl now accompanies them. It is up to Ayane and the remnants of A.E.G.I.S to stop them and save humanity once again. (Source: ANN)

Izumi Sawatari and her younger sister, Mitsuki Sawatari, have run away from home and are in need of employment. The only jobs available are as maids in the mansion of 14-year-old millionaire, Yoshitaka Nakabayashi. What seems like simple work is soon revealed to be far more than the girls bargained for when they find Yoshitaka to be an authoritative employer who demands they call him "Master".